Reproducibility package for Estimating Extinction Threats with Species Occurrence Data from the Global Biodiversity Information Facility

2024

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Reference ID

RR_WLD_2024_191

DOI

https://doi.org/10.60572/vng0-nv07

Author(s)

Susmita Dasgupta, Brian Blankespoor, David Wheeler

Collections

World Bank Policy Research Working Papers

Metadata

JSON

Created on

Nov 19, 2024

Last modified

Dec 11, 2024

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README for the reproducibility package for Estimating Extinction Threats with Species Occurrence Data from the Global Biodiversity Information Facility

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Reproducibility package (code and data) for Estimating Extinction Threats with Species Occurrence Data from the Global Biodiversity Information Facility

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Zip preview	RR_WLD_2024_191 LICENSE.txt README.pdf reproducibility-package .Rprofile biod_threats_wp_fig01_terrestrial_species_with_maxcut_occurrence_reports_by_pop_groups.R biod_threats_wp_fig02_plants_and_vertebrates_iucn_match_count.r biod_threats_wp_fig03_plants_and_vertebrates_iucn_match_tprob.r biod_threats_wp_fig04_plants_and_vertebrates_gbif_all_tprob.r biod_threats_wp_fig05_Normalized_GBIF_Tprob_Differences.r biod_threats_wp_fig06_LC_assignment_vs_range_scale.R biod_threats_wp_fig07_plants_and_vertebrates_all_species_tprob_by_threat_group.R biod_threats_wp_fig08_plants_and_vertebrates_all_species_tprob_stacked_by_threat_group.R biod_threats_wp_fig09_plants_and_vertebrates_all_species_western_south_america_by_threat_group.r biod_threats_wp_fig10_GBIF_Plants_Vertebrates_Dif_Tprob_vs_stackedAB.R biod_threats_wp_fig11_GBIF_Plants_Vertebrates_five_threat_indicators.R biod_threats_wp_global_libraries.R biod_threats_wp_load_boundary_data.R biod_threats_wp_load_gridded_data_ddh.R biod_threats_wp_load_iucn_species_level_data.R biod_threats_wp_load_species_level_data.R biod_threats_wp_tbl01_corr_vars_and_tbl02_ordered_logit_results.R biod_threats_wp_tbl03_model_predicted_risk_assignments_vs_IUCN_assignments.R biod_threats_wp_tbl04_range_sizes_of_top-ranking_species_tprob.R biod_threats_wp__main.R local_data Boundary_Data_50mil ne_50m_WB_admin_0_boundary_lines.CPG ne_50m_WB_admin_0_boundary_lines.dbf ne_50m_WB_admin_0_boundary_lines.prj ne_50m_WB_admin_0_boundary_lines.sbn ne_50m_WB_admin_0_boundary_lines.sbx ne_50m_WB_admin_0_boundary_lines.shp ne_50m_WB_admin_0_boundary_lines.shp.xml ne_50m_WB_admin_0_boundary_lines.shx ne_50m_WB_admin_0_boundary_lines_disputed.CPG ne_50m_WB_admin_0_boundary_lines_disputed.dbf ne_50m_WB_admin_0_boundary_lines_disputed.prj ne_50m_WB_admin_0_boundary_lines_disputed.sbn ne_50m_WB_admin_0_boundary_lines_disputed.sbx ne_50m_WB_admin_0_boundary_lines_disputed.shp ne_50m_WB_admin_0_boundary_lines_disputed.shp.xml ne_50m_WB_admin_0_boundary_lines_disputed.shx ne_50m_WB_coastline.CPG ne_50m_WB_coastline.dbf ne_50m_WB_coastline.prj ne_50m_WB_coastline.sbn ne_50m_WB_coastline.sbx ne_50m_WB_coastline.shp ne_50m_WB_coastline.shx renv .gitignore activate.R settings.json renv.lock reproducibility_report_RR_WLD_2024_191.pdf

Reproducibility verification for the reproducibility package for Estimating Extinction Threats with Species Occurrence Data from the Global Biodiversity Information Facility

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